BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015B05SP1|AL426791
(1006 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1449 975 0.0
3x_Contig1527 871 0.0
>3x_Contig1449
Length = 7865
Score = 975 bits (491), Expect = 0.0
Identities = 505/507 (99%), Gaps = 2/507 (0%)
Strand = Plus / Minus
Query: 33 atcattacggatctttgtttgtttggcctttgttcacatggagtgcaggccctttattaa 92
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 atcattacggatctttgtttgtttggcctttgttcacatggagtgcaggccctttattaa 453
Query: 93 gtattactgggacctctcagagttagtatttccaaaaaaaaaaaaaagagaaagtactag 152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 gtattactgggacctctcagagttagtatttccaaaaaaaaaaaaaagagaaagtactag 393
Query: 153 ttttaaacattcagttcttattgaaagcacagacatatgccaagaaagggttataatatt 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 ttttaaacattcagttcttattgaaagcacagacatatgccaagaaagggttataatatt 333
Query: 213 gtcaagaaggctccagtatattgttcctgcttttcacaatgccagaaactttaaacgata 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gtcaagaaggctccagtatattgttcctgcttttcacaatgccagaaactttaaacgata 273
Query: 273 gcaataaacgtgcgcttcctgaggtgaattcggaattagaaagcacagaaactcctgtga 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gcaataaacgtgcgcttcctgaggtgaattcggaattagaaagcacagaaactcctgtga 213
Query: 333 agaaggtcaaactcaatgataaagatgaagcaaaaccttcagaagagactgataagttca 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 agaaggtcaaactcaatgataaagatgaagcaaaaccttcagaagagactgataagttca 153
Query: 393 taacagagaatgatacagcaaatgaagaggccaattccgtagagagacctaaaaatattg 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 taacagagaatgatacagcaaatgaagaggccaattccgtagagagacctaaaaatattg 93
Query: 453 aaactgctgagacaacggaaacagcggtaacaaaagaagaagatacaaataataaaaaag 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 aaactgctgagacaacggaaacagcggtaacaaaagaagaagatacaaataataaaaaag 33
Query: 513 aagaagaggccaaggaaaaagatgagg 539
||||||| ||||| |||||||||||||
Sbjct: 32 aagaaga-gccaa-gaaaaagatgagg 8
>3x_Contig1527
Length = 8131
Score = 871 bits (439), Expect = 0.0
Identities = 456/459 (99%), Gaps = 2/459 (0%)
Strand = Plus / Plus
Query: 547 ggcagagatagaagggaagaaaacagaacctaaaccagaaaaagacgtggaaaaaccatc 606
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 ggcagagatagaaggga-gaaaacagaacctaaaccagaaaaagacgtggaaaaaccatc 63
Query: 607 gttcacatttggccaatcttcaagttttgtttctggctttggagtggcaactaaaccatt 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 gttcacatttggccaatcttcaagttttgtttctggctttggagtggcaactaaaccatt 123
Query: 667 tggagcagccaatgctttttctgctggtttacctgcggctaaaaccactgagaaagatgg 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 tggagcagccaatgctttttctgctggtttacctgcggctaaaaccactgagaaagatgg 183
Query: 727 -aaataaggacaccgtcaaggttgaaccaggtttctcgttcggatctggtctatcatttg 785
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 gaaataaagacaccgtcaaggttgaaccaggtttctcgttcggatctggtctatcatttg 243
Query: 786 gtgctggattcaaagctgcaaaagtagcctccaaagatagtgttgcaaaagacaagcaaa 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gtgctggattcaaagctgcaaaagtagcctccaaagatagtgttgcaaaagacaagcaaa 303
Query: 846 cagtcgaatcagaaaaaaaggaaagtactccagcccaatcaagagagccaacagtaaaat 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 cagtcgaatcagaaaaaaaggaaagtactccagcccaatcaagagagccaacagtaaaat 363
Query: 906 taacgaaacaagacgtcaaatcgggcgaagagacagaagaatcgatcttccaaacaaatg 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 taacgaaacaagacgtcaaatcgggcgaagagacagaagaatcgatcttccaaacaaatg 423
Query: 966 ccaagctgtatcagcttaccgatataaaggatggttgga 1004
|||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ccaagctgtatcagcttaccgatataaaggatggttgga 462
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 17,678
Number of Sequences: 1807
Number of extensions: 17678
Number of successful extensions: 434
Number of sequences better than 1.0e-20: 2
length of query: 1006
length of database: 10,358,551
effective HSP length: 16
effective length of query: 990
effective length of database: 10,329,639
effective search space: 10226342610
effective search space used: 10226342610
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)